Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Gm10399-202ENSMUST00000202768 748 ntBASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Igkv1-88A0A140T8N1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Cap2-205ENSMUST00000225824 1634 ntBASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Igkv1-88A0A140T8N1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Igkv1-88A0A140T8N1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC12.83□□□□□ -0.35
Igkv1-88A0A140T8N1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Igkv1-88A0A140T8N1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC12.82□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm9954-202ENSMUST00000198686 4725 ntBASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm43909-201ENSMUST00000203443 1876 ntBASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Igkv1-88A0A140T8N1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Gm10232-201ENSMUST00000089221 720 ntBASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Igkv1-88A0A140T8N1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Igkv1-88A0A140T8N1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms