Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
Trav9-4A0A0B4J1K2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gm43017-201ENSMUST00000198296 752 ntBASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gm43173-201ENSMUST00000202246 593 ntBASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav9-4A0A0B4J1K2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Trav9-4A0A0B4J1K2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
Trav9-4A0A0B4J1K2 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9-4A0A0B4J1K2 AA386476-201ENSMUST00000098781 1665 ntBASIC14.58□□□□□ -0.07
Trav9-4A0A0B4J1K2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9-4A0A0B4J1K2 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav9-4A0A0B4J1K2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-4A0A0B4J1K2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC14.58□□□□□ -0.08
Trav9-4A0A0B4J1K2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-4A0A0B4J1K2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-4A0A0B4J1K2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav9-4A0A0B4J1K2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav9-4A0A0B4J1K2 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav9-4A0A0B4J1K2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav9-4A0A0B4J1K2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav9-4A0A0B4J1K2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Smad6-203ENSMUST00000179458 273 ntBASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trav9-4A0A0B4J1K2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms