Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm17391-201ENSMUST00000171036 126 ntBASIC7.9□□□□□ -1.14
Hmgb3O54879 Gm44216-201ENSMUST00000203942 157 ntBASIC7.9□□□□□ -1.14
Hmgb3O54879 Gm44100-201ENSMUST00000204329 436 ntBASIC7.9□□□□□ -1.14
Hmgb3O54879 Gm9487-201ENSMUST00000216600 472 ntBASIC7.9□□□□□ -1.14
Hmgb3O54879 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb3O54879 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb3O54879 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC7.9□□□□□ -1.14
Hmgb3O54879 Cd101-201ENSMUST00000147399 3299 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Hmgb3O54879 Sfmbt1-204ENSMUST00000227303 2960 ntBASIC7.9□□□□□ -1.15
Hmgb3O54879 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.9□□□□□ -1.15
Hmgb3O54879 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.15
Hmgb3O54879 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC7.9□□□□□ -1.15
Hmgb3O54879 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Itgb2l-201ENSMUST00000000161 2633 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Ttc16-207ENSMUST00000161950 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Atf7-203ENSMUST00000169033 2165 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Txnrd1-205ENSMUST00000219368 3622 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Hmgb3O54879 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.9□□□□□ -1.15
Hmgb3O54879 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Hmgb3O54879 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC7.9□□□□□ -1.15
Hmgb3O54879 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC7.9□□□□□ -1.15
Hmgb3O54879 Samd3-201ENSMUST00000060716 1874 ntAPPRIS P4 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm12758-201ENSMUST00000127010 4175 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm44664-201ENSMUST00000206841 1786 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm42856-201ENSMUST00000200848 2852 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Nrf1-202ENSMUST00000069808 1658 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm38066-201ENSMUST00000193223 1634 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 AC142266.1-202ENSMUST00000227784 3733 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 CT009713.3-201ENSMUST00000224987 1565 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Irf2-201ENSMUST00000034041 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Kcnip4-204ENSMUST00000166924 2257 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 A630001O12Rik-201ENSMUST00000212914 2182 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Ptrh2-202ENSMUST00000108022 3038 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Spaca9-201ENSMUST00000102877 671 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm11189-201ENSMUST00000117979 375 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm15373-201ENSMUST00000121495 214 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm13182-201ENSMUST00000122241 312 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 n-R5s130-201ENSMUST00000178128 119 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm24312-201ENSMUST00000178677 119 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 n-R5s106-201ENSMUST00000179060 119 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 n-R5s118-201ENSMUST00000179887 119 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm9515-201ENSMUST00000200276 647 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm44158-201ENSMUST00000203881 505 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm18119-201ENSMUST00000219972 616 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 H2-M1-201ENSMUST00000041662 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Klhl15-209ENSMUST00000170594 2027 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Zfp384-203ENSMUST00000084275 2829 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 BC039771-202ENSMUST00000144661 2753 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Dpysl3-202ENSMUST00000118043 1986 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Trpc7-202ENSMUST00000109871 3519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Dgkeos-204ENSMUST00000178493 1902 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Tcf23-201ENSMUST00000006818 4116 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm45289-201ENSMUST00000211048 2577 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Kctd1-201ENSMUST00000025992 1772 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Ppp1r9a-201ENSMUST00000035813 9547 ntAPPRIS P2 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC7.89□□□□□ -1.15
Hmgb3O54879 Eef1d-218ENSMUST00000154584 1721 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm5472-201ENSMUST00000178604 1678 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Hmgcr-209ENSMUST00000170287 2981 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm42731-201ENSMUST00000201839 1641 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Vti1a-202ENSMUST00000223690 4175 ntBASIC7.89□□□□□ -1.15
Hmgb3O54879 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 2810407A14Rik-202ENSMUST00000189929 2172 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Hmgb3O54879 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms