Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Hdac7-208ENSMUST00000121514 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Ppp1r9a-206ENSMUST00000175962 3769 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Mcm5-201ENSMUST00000164309 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm6755-201ENSMUST00000100598 864 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm6740-201ENSMUST00000100617 864 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm26288-201ENSMUST00000104168 132 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Tnnt3-213ENSMUST00000105952 1040 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Tnnt3-214ENSMUST00000105953 1049 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Tnnt3-215ENSMUST00000105954 1052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Tnnt3-216ENSMUST00000105955 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Tnnt3-218ENSMUST00000105958 1050 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm13171-201ENSMUST00000117233 391 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Olfr333-ps1-201ENSMUST00000122311 940 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Zfp961-204ENSMUST00000136516 601 ntTSL 2 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm13629-201ENSMUST00000141149 1022 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm15587-202ENSMUST00000156403 709 ntTSL 5 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Tnnt3-225ENSMUST00000179658 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Mir7088-201ENSMUST00000184227 86 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm7815-201ENSMUST00000196104 832 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Ighv1-70-201ENSMUST00000196509 351 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm6331-201ENSMUST00000217890 450 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Pln-205ENSMUST00000219921 531 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 AC140375.1-201ENSMUST00000225421 694 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 AC154643.1-201ENSMUST00000225643 625 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm4889-201ENSMUST00000075321 444 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Tnnt3-202ENSMUST00000078497 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Zcchc8-201ENSMUST00000031376 4286 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Hyal1-201ENSMUST00000010195 3014 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Nbdy-204ENSMUST00000185492 1346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Nup107-201ENSMUST00000064848 3114 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Cald1-203ENSMUST00000115021 4041 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Btbd7-201ENSMUST00000045652 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Ces1e-203ENSMUST00000176282 1883 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Gm8806-201ENSMUST00000120076 1407 ntBASIC9.21□□□□□ -0.94
Clrn1Q8K445 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Plut-202ENSMUST00000174285 1444 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Cd1d1-201ENSMUST00000029717 1946 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Anapc1-201ENSMUST00000014499 8942 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clrn1Q8K445 Dync1i2-206ENSMUST00000112140 2573 ntAPPRIS ALT1 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Wdr77-201ENSMUST00000010278 3682 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Pycard-201ENSMUST00000033056 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm11426-201ENSMUST00000125600 2220 ntTSL 2 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm10790-202ENSMUST00000221285 1696 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Arpp19-205ENSMUST00000168166 3944 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Eif3c-201ENSMUST00000032992 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm18638-201ENSMUST00000211293 1773 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Zfp58-201ENSMUST00000076123 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Decr1-201ENSMUST00000029877 2959 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 R3hdm2-218ENSMUST00000170336 3639 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Spocd1-201ENSMUST00000084263 3096 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm14539-201ENSMUST00000117527 174 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm15132-201ENSMUST00000118581 652 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm15247-201ENSMUST00000124513 403 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm14817-201ENSMUST00000148522 643 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm11942-201ENSMUST00000180255 345 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Scgb1b11-201ENSMUST00000186031 418 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Scgb1b18-201ENSMUST00000191255 402 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Tmem89-202ENSMUST00000192852 945 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Ighv5-18-201ENSMUST00000193834 326 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Ighv1-57-201ENSMUST00000194898 349 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 AC138716.2-201ENSMUST00000226670 1016 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Far1-211ENSMUST00000164745 3972 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Ift122-201ENSMUST00000038234 4056 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Sept11-207ENSMUST00000202217 1380 ntTSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Amt-201ENSMUST00000035230 2082 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm15666-202ENSMUST00000219490 2796 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Gm37003-201ENSMUST00000194702 2827 ntBASIC9.2□□□□□ -0.94
Clrn1Q8K445 Cacna1c-220ENSMUST00000189520 6570 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Il18bp-203ENSMUST00000209844 1594 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Eapp-204ENSMUST00000161592 4186 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clrn1Q8K445 Ccnc-201ENSMUST00000065928 3484 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Clrn1Q8K445 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms