Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm35725-201ENSMUST00000221862 2800 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Inpp1-201ENSMUST00000027271 5767 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm45746-201ENSMUST00000212623 2447 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Olfr30-202ENSMUST00000215691 2404 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Hmgb3O54879 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Hmgb3O54879 Gm37731-201ENSMUST00000194545 2237 ntBASIC7.97□□□□□ -1.13
Hmgb3O54879 Lilr4b-201ENSMUST00000102894 1836 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 AC151836.1-201ENSMUST00000228730 1637 ntBASIC7.96□□□□□ -1.13
Hmgb3O54879 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.13
Hmgb3O54879 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.13
Hmgb3O54879 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Sh3bgrl2-204ENSMUST00000188241 3155 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Ago3-201ENSMUST00000069097 15595 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Vamp3-201ENSMUST00000030797 2120 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Ggt5-201ENSMUST00000072217 4410 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Hmgb3O54879 Nsdhl-201ENSMUST00000033715 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm43820-201ENSMUST00000199414 3346 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm45205-201ENSMUST00000205745 3330 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Prokr2-203ENSMUST00000110157 4005 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Rnf19a-201ENSMUST00000022890 4277 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Hmgb3O54879 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm13303-201ENSMUST00000117125 1284 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm12179-201ENSMUST00000118344 1272 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm12741-201ENSMUST00000118836 556 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm6758-201ENSMUST00000119643 1055 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm24352-201ENSMUST00000158966 125 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC7.96□□□□□ -1.14
Hmgb3O54879 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm18894-201ENSMUST00000198794 694 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm43460-201ENSMUST00000202491 1057 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm3017-201ENSMUST00000203603 1126 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Tas2r141-ps4-201ENSMUST00000205072 946 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm6518-201ENSMUST00000208450 342 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Gm2594-201ENSMUST00000214774 742 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 4930448C13Rik-205ENSMUST00000221781 806 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 AC134860.2-201ENSMUST00000225277 1036 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Mrps14-202ENSMUST00000097193 787 ntTSL 2 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Tc2n-204ENSMUST00000162735 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Aqp7-201ENSMUST00000030136 2527 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Thsd1-202ENSMUST00000160585 3276 ntTSL 5 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Fmn1-203ENSMUST00000102547 4967 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Spire1-207ENSMUST00000224799 2059 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Ipo11-202ENSMUST00000080856 4325 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC7.96□□□□□ -1.14
Hmgb3O54879 Igsf5-203ENSMUST00000113794 1601 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 4930435N07Rik-201ENSMUST00000208065 2127 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 AC154640.1-203ENSMUST00000228316 1618 ntBASIC7.96□□□□□ -1.14
Hmgb3O54879 P2rx7-201ENSMUST00000031425 1605 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Hmgb3O54879 Zfp563-201ENSMUST00000131722 1938 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gpr171-201ENSMUST00000085040 2225 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 9930014A18Rik-202ENSMUST00000181910 4116 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Cnga2-201ENSMUST00000006020 3064 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Tango6-201ENSMUST00000048359 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Smok4a-201ENSMUST00000074512 1455 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm5641-201ENSMUST00000091130 1488 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Pla2g6-202ENSMUST00000166977 3365 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Acsl6-205ENSMUST00000094194 2554 ntAPPRIS ALT1 TSL 5 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Wdr11-201ENSMUST00000084519 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm11518-201ENSMUST00000118048 411 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm10169-201ENSMUST00000121822 348 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm22379-201ENSMUST00000157480 131 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm16574-201ENSMUST00000159301 745 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Hmgb3O54879 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm8531-201ENSMUST00000188319 893 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm31274-201ENSMUST00000197356 229 ntBASIC7.95□□□□□ -1.14
Hmgb3O54879 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms