Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 5930420M18Rik-201ENSMUST00000202893 2281 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Mark1-201ENSMUST00000027929 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Pan2-201ENSMUST00000005825 4445 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Oacyl-202ENSMUST00000117694 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm9978-201ENSMUST00000069431 3273 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Pde2a-212ENSMUST00000211368 3885 ntAPPRIS P3 TSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Sorbs1-221ENSMUST00000225786 2314 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 AC090962.1-201ENSMUST00000226066 1799 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Eif2d-203ENSMUST00000112446 2153 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Rab3gap1-207ENSMUST00000212506 2967 ntAPPRIS ALT2 TSL 5 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Slc25a14-204ENSMUST00000134257 1805 ntAPPRIS ALT1 TSL 5 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm13608-201ENSMUST00000121807 1406 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm15423-201ENSMUST00000150600 1430 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Tmem29-201ENSMUST00000059256 1402 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Abcb1a-201ENSMUST00000047753 4997 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Igsf5-201ENSMUST00000000163 1851 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 AC167565.2-201ENSMUST00000227042 1870 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Acox2-204ENSMUST00000164598 2907 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Itgam-203ENSMUST00000106242 4649 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Sepsecs-201ENSMUST00000031069 5252 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Chid1-209ENSMUST00000166082 4222 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm13426-201ENSMUST00000117887 795 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm8864-201ENSMUST00000118653 1010 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm12377-201ENSMUST00000118656 252 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm15650-201ENSMUST00000135451 770 ntTSL 3 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm7805-201ENSMUST00000154348 448 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm26368-201ENSMUST00000157826 118 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Tmbim6-205ENSMUST00000160635 871 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm20463-201ENSMUST00000174756 366 ntTSL 3 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm26679-201ENSMUST00000181685 659 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm17797-201ENSMUST00000182175 997 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm8907-201ENSMUST00000182240 1003 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm7593-201ENSMUST00000187246 644 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm43480-201ENSMUST00000201201 416 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 AC118639.1-202ENSMUST00000226957 653 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Rps3a3-201ENSMUST00000074680 795 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm26226-201ENSMUST00000082509 116 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm10530-201ENSMUST00000097514 1169 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Slco5a1-205ENSMUST00000146763 3437 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Kif16b-203ENSMUST00000211861 4523 ntTSL 5 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 AC124433.1-202ENSMUST00000224762 1535 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Tmem135-201ENSMUST00000041968 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Radil-202ENSMUST00000085758 3714 ntAPPRIS ALT2 TSL 2 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Crat-203ENSMUST00000102855 4224 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Ggcx-201ENSMUST00000065906 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Drosha-201ENSMUST00000090292 4519 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Actbl2-201ENSMUST00000054716 2737 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm15663-201ENSMUST00000145794 3200 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Gm45768-201ENSMUST00000206763 3202 ntBASIC9.24□□□□□ -0.93
Clrn1Q8K445 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC9.24□□□□□ -0.93
Clrn1Q8K445 Ctage5-201ENSMUST00000021384 1628 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Tmem130-201ENSMUST00000061446 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm19026-201ENSMUST00000194240 4530 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Pla2g6-202ENSMUST00000166977 3365 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Olfr156-201ENSMUST00000079234 1740 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Dgki-201ENSMUST00000042075 3028 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Bnip3-201ENSMUST00000106112 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Tph1-202ENSMUST00000107669 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Igbp1-201ENSMUST00000033570 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm11800-201ENSMUST00000120050 579 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm4943-201ENSMUST00000132879 424 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm12254-201ENSMUST00000134617 471 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Rps28-205ENSMUST00000173844 382 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm25591-201ENSMUST00000177317 94 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm23521-201ENSMUST00000177845 110 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm5976-201ENSMUST00000180794 996 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm8079-201ENSMUST00000182695 975 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm7627-201ENSMUST00000183205 999 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm27605-201ENSMUST00000184648 136 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm18351-201ENSMUST00000188646 883 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm38132-201ENSMUST00000193358 707 ntTSL 3 BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm44978-201ENSMUST00000206635 317 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm18164-201ENSMUST00000213769 927 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm18166-201ENSMUST00000215557 927 ntBASIC9.23□□□□□ -0.93
Clrn1Q8K445 Gm18029-201ENSMUST00000219973 844 ntBASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms