Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 AC151903.1-201ENSMUST00000226677 1423 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm15074-201ENSMUST00000117603 936 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm6939-201ENSMUST00000122029 864 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Ube4bos3-201ENSMUST00000155845 756 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm3617-201ENSMUST00000173076 555 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm26834-201ENSMUST00000181815 950 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm7776-201ENSMUST00000191211 720 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm44744-201ENSMUST00000208234 852 ntTSL 3 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Nosip-207ENSMUST00000210520 534 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 AL672010.1-201ENSMUST00000215182 1246 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 AC174647.1-201ENSMUST00000227419 1271 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 AC125539.1-201ENSMUST00000227423 622 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Cks2-201ENSMUST00000075853 692 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm26673-201ENSMUST00000181126 3377 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm12014-201ENSMUST00000120164 1620 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Pcdh1-201ENSMUST00000057185 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Zmym6-202ENSMUST00000094713 3922 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm20658-202ENSMUST00000177059 1950 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm44992-210ENSMUST00000210126 1330 ntTSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm43633-201ENSMUST00000202455 2330 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Adamts6-201ENSMUST00000065766 4822 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Ptpn20-201ENSMUST00000022508 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm44168-201ENSMUST00000204835 3539 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Arhgap17-203ENSMUST00000167309 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gpr156-201ENSMUST00000061274 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm37233-201ENSMUST00000192173 6263 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 4930470P17Rik-201ENSMUST00000062355 1395 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Pfkfb2-201ENSMUST00000050406 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Ndrg4-201ENSMUST00000041318 3101 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gtpbp10-202ENSMUST00000115441 2972 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Tnxa-201ENSMUST00000173277 2975 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Cass4-204ENSMUST00000228775 2629 ntAPPRIS ALT2 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Arhgap32-206ENSMUST00000182802 5621 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm15448-204ENSMUST00000153846 2145 ntAPPRIS P5 TSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Tcaf2-201ENSMUST00000031879 4497 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Kidins220-202ENSMUST00000220459 5381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Scml2-202ENSMUST00000074802 3440 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm15707-201ENSMUST00000118804 996 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm15636-201ENSMUST00000119205 668 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm15373-201ENSMUST00000121495 214 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm15280-201ENSMUST00000126961 640 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 1700057H15Rik-202ENSMUST00000143859 704 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm12154-201ENSMUST00000145584 445 ntTSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 D430040D24Rik-201ENSMUST00000149224 910 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Pcsk2os1-202ENSMUST00000156780 527 ntTSL 3 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm25025-201ENSMUST00000175018 111 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm24954-201ENSMUST00000178831 110 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm6317-201ENSMUST00000183159 1000 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm8707-201ENSMUST00000183325 980 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm37994-201ENSMUST00000192124 409 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm36982-201ENSMUST00000193796 1128 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Trav11n-201ENSMUST00000200113 343 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm43377-201ENSMUST00000201640 455 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm44552-201ENSMUST00000205458 1247 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm18749-201ENSMUST00000222410 692 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Smim4-201ENSMUST00000049732 311 ntAPPRIS P1 TSL 2 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm26205-201ENSMUST00000082907 134 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Mir326-201ENSMUST00000083637 95 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Rpgr-202ENSMUST00000072393 2380 ntAPPRIS ALT2 TSL 2 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 4930556L07Rik-201ENSMUST00000134422 1490 ntTSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm36211-201ENSMUST00000198171 1497 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm45757-201ENSMUST00000211835 1480 ntBASIC9.25□□□□□ -0.93
Clrn1Q8K445 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Xpnpep2-203ENSMUST00000115000 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Armc9-202ENSMUST00000113309 3555 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Olfr152-202ENSMUST00000105210 2084 ntAPPRIS ALT1 TSL 5 BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Mthfd1-206ENSMUST00000220046 3040 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Clrn1Q8K445 Gm15204-201ENSMUST00000119454 2281 ntBASIC9.25□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms