Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Mir6923-201ENSMUST00000184592 72 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm36307-201ENSMUST00000195831 953 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm44236-201ENSMUST00000204492 513 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm18745-201ENSMUST00000216018 548 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 AC132384.2-201ENSMUST00000218018 526 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm34776-201ENSMUST00000219415 1140 ntTSL 5 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 CT025603.2-201ENSMUST00000224369 484 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 AC107711.3-201ENSMUST00000228939 1035 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm8730-201ENSMUST00000076373 954 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Hdac7-204ENSMUST00000116409 4113 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Tmprss13-201ENSMUST00000034597 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Nrip3-202ENSMUST00000041460 3927 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Pfkfb2-210ENSMUST00000189167 1558 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC9.28□□□□□ -0.92
Clrn1Q8K445 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Gm15599-201ENSMUST00000122283 1345 ntBASIC9.28□□□□□ -0.92
Clrn1Q8K445 Chid1-201ENSMUST00000026586 3964 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Mfap3l-201ENSMUST00000034066 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Clrn1Q8K445 Spata16-201ENSMUST00000047005 2022 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.92
Clrn1Q8K445 Gm28321-201ENSMUST00000187677 2327 ntBASIC9.27□□□□□ -0.92
Clrn1Q8K445 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Clrn1Q8K445 Slc12a5-209ENSMUST00000202623 3574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Cel-201ENSMUST00000028161 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Itga7-201ENSMUST00000099112 4013 ntAPPRIS P2 TSL 2 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Zmat3-203ENSMUST00000168566 7672 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Tpt1-ps5-201ENSMUST00000112150 516 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm15041-201ENSMUST00000119048 756 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm13624-201ENSMUST00000120263 462 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm14639-201ENSMUST00000120850 866 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Vmn1r-ps114-201ENSMUST00000121050 1040 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm12826-201ENSMUST00000121841 379 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Hnf1aos1-202ENSMUST00000129609 516 ntTSL 2 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm13898-201ENSMUST00000141865 610 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Cdk2ap2-203ENSMUST00000174149 386 ntTSL 2 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Mir6953-201ENSMUST00000184745 68 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm38004-201ENSMUST00000192972 357 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm7238-201ENSMUST00000206467 973 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 1700008N11Rik-201ENSMUST00000209848 636 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm9204-201ENSMUST00000212641 947 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 CT009757.1-201ENSMUST00000222801 738 ntTSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 AC154759.1-201ENSMUST00000224137 1159 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 AC158388.3-202ENSMUST00000225517 775 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Phf5a-201ENSMUST00000023117 864 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm6960-201ENSMUST00000051629 639 ntBASIC9.27□□□□□ -0.93
Clrn1Q8K445 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 A830005F24Rik-201ENSMUST00000065465 786 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gpn1-201ENSMUST00000076949 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Xpo5-201ENSMUST00000087031 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Rel-201ENSMUST00000102864 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm13128-201ENSMUST00000105751 1745 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Col4a5-202ENSMUST00000112931 6536 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Btn2a2-202ENSMUST00000110432 2089 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm26625-201ENSMUST00000181519 2538 ntTSL 5 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Gm10608-201ENSMUST00000093527 2509 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Phc1-203ENSMUST00000112600 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Ttc39b-203ENSMUST00000102823 8831 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Clrn1Q8K445 Eef2k-204ENSMUST00000106489 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Anxa7-207ENSMUST00000224975 2727 ntAPPRIS P2 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 CT009601.1-201ENSMUST00000225567 2705 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Pmel-201ENSMUST00000054125 2130 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Myh4-202ENSMUST00000170942 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm26700-201ENSMUST00000181480 1957 ntTSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 AC107453.4-201ENSMUST00000227068 1817 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Kif23-201ENSMUST00000034815 3398 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm37521-201ENSMUST00000193177 2045 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm15612-201ENSMUST00000147542 3118 ntTSL 2 BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Gm15550-201ENSMUST00000120824 1748 ntBASIC9.26□□□□□ -0.93
Clrn1Q8K445 Zfp541-201ENSMUST00000108509 4561 ntAPPRIS P2 TSL 1 (best) BASIC9.26□□□□□ -0.93
Clrn1Q8K445 Odf2-207ENSMUST00000113762 2353 ntTSL 5 BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms