Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Gm21956-201ENSMUST00000179946 522 ntBASIC19.56■□□□□ 0.72
H2afb2S4R1M3 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.56■□□□□ 0.72
H2afb2S4R1M3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb2S4R1M3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb2S4R1M3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.54■□□□□ 0.72
H2afb2S4R1M3 Gm43137-201ENSMUST00000198052 594 ntBASIC19.54■□□□□ 0.72
H2afb2S4R1M3 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb2S4R1M3 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb2S4R1M3 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb2S4R1M3 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb2S4R1M3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb2S4R1M3 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
H2afb2S4R1M3 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.52■□□□□ 0.71
H2afb2S4R1M3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
H2afb2S4R1M3 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.5■□□□□ 0.71
H2afb2S4R1M3 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.49■□□□□ 0.71
H2afb2S4R1M3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb2S4R1M3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb2S4R1M3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.47■□□□□ 0.71
H2afb2S4R1M3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
H2afb2S4R1M3 Spcs1-204ENSMUST00000226782 949 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 1249.2 ms