Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn9Q9Z0S7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn9Q9Z0S7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn9Q9Z0S7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn9Q9Z0S7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn9Q9Z0S7 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.79■□□□□ 0.6
Cldn9Q9Z0S7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn9Q9Z0S7 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn9Q9Z0S7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.79■□□□□ 0.6
Cldn9Q9Z0S7 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cldn9Q9Z0S7 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cldn9Q9Z0S7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Cldn9Q9Z0S7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cldn9Q9Z0S7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cldn9Q9Z0S7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn9Q9Z0S7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn9Q9Z0S7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn9Q9Z0S7 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.74■□□□□ 0.59
Cldn9Q9Z0S7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn9Q9Z0S7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cldn9Q9Z0S7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
Cldn9Q9Z0S7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 Gm13241-201ENSMUST00000094493 780 ntBASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cldn9Q9Z0S7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cldn9Q9Z0S7 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.71■□□□□ 0.59
Cldn9Q9Z0S7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn9Q9Z0S7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn9Q9Z0S7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn9Q9Z0S7 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.71■□□□□ 0.59
Cldn9Q9Z0S7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cldn9Q9Z0S7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Cldn9Q9Z0S7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Cldn9Q9Z0S7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
Cldn9Q9Z0S7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
Cldn9Q9Z0S7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cldn9Q9Z0S7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms