Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Msh5Q9QUM7 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Msh5Q9QUM7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh5Q9QUM7 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Msh5Q9QUM7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.8■□□□□ 0.76
Msh5Q9QUM7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Msh5Q9QUM7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh5Q9QUM7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Msh5Q9QUM7 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Msh5Q9QUM7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh5Q9QUM7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh5Q9QUM7 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Msh5Q9QUM7 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Msh5Q9QUM7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Msh5Q9QUM7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Msh5Q9QUM7 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Msh5Q9QUM7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh5Q9QUM7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh5Q9QUM7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Msh5Q9QUM7 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.75■□□□□ 0.75
Msh5Q9QUM7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Msh5Q9QUM7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Msh5Q9QUM7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh5Q9QUM7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh5Q9QUM7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Msh5Q9QUM7 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Msh5Q9QUM7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Msh5Q9QUM7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh5Q9QUM7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Gm13241-201ENSMUST00000094493 780 ntBASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh5Q9QUM7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh5Q9QUM7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms