Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rfx5Q9JL61 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Rfx5Q9JL61 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Rfx5Q9JL61 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rfx5Q9JL61 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx5Q9JL61 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx5Q9JL61 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx5Q9JL61 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.75■□□□□ 0.91
Rfx5Q9JL61 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Rfx5Q9JL61 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rfx5Q9JL61 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
Rfx5Q9JL61 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rfx5Q9JL61 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rfx5Q9JL61 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rfx5Q9JL61 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rfx5Q9JL61 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx5Q9JL61 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rfx5Q9JL61 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Rfx5Q9JL61 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx5Q9JL61 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx5Q9JL61 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx5Q9JL61 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rfx5Q9JL61 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
Rfx5Q9JL61 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 Gm27801-201ENSMUST00000184174 223 ntBASIC20.67■□□□□ 0.9
Rfx5Q9JL61 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfx5Q9JL61 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms