Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtp4Q9ER80 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtp4Q9ER80 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Rtp4Q9ER80 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Rtp4Q9ER80 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtp4Q9ER80 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtp4Q9ER80 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.27■□□□□ 0.52
Rtp4Q9ER80 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtp4Q9ER80 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.27■□□□□ 0.52
Rtp4Q9ER80 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Rtp4Q9ER80 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Rtp4Q9ER80 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtp4Q9ER80 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtp4Q9ER80 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Rtp4Q9ER80 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Rtp4Q9ER80 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rtp4Q9ER80 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Gm26833-201ENSMUST00000180899 440 ntBASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtp4Q9ER80 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtp4Q9ER80 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Rtp4Q9ER80 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtp4Q9ER80 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms