Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Gm8493-201ENSMUST00000196881 489 ntBASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vps35Q9EQH3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.52■□□□□ 0.72
Vps35Q9EQH3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Vps35Q9EQH3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vps35Q9EQH3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Gm43173-201ENSMUST00000202246 593 ntBASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps35Q9EQH3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps35Q9EQH3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps35Q9EQH3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps35Q9EQH3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Iqck-206ENSMUST00000208658 2891 ntBASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Vps35Q9EQH3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Vps35Q9EQH3 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Vps35Q9EQH3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Vps35Q9EQH3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.45■□□□□ 0.7
Vps35Q9EQH3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.45■□□□□ 0.7
Vps35Q9EQH3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Vps35Q9EQH3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms