Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 AA386476-201ENSMUST00000098781 1665 ntBASIC19.43■□□□□ 0.7
Nif3l1Q9EQ80 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Nif3l1Q9EQ80 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Nif3l1Q9EQ80 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.4■□□□□ 0.7
Nif3l1Q9EQ80 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Nif3l1Q9EQ80 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Gm6139-201ENSMUST00000079261 882 ntBASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Nif3l1Q9EQ80 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Gm43173-201ENSMUST00000202246 593 ntBASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Nif3l1Q9EQ80 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nif3l1Q9EQ80 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.37■□□□□ 0.69
Nif3l1Q9EQ80 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.37■□□□□ 0.69
Nif3l1Q9EQ80 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Nif3l1Q9EQ80 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Nif3l1Q9EQ80 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nif3l1Q9EQ80 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nif3l1Q9EQ80 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nif3l1Q9EQ80 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nif3l1Q9EQ80 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.35■□□□□ 0.69
Nif3l1Q9EQ80 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nif3l1Q9EQ80 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nif3l1Q9EQ80 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nif3l1Q9EQ80 Serp2-204ENSMUST00000228055 705 ntBASIC19.33■□□□□ 0.68
Nif3l1Q9EQ80 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nif3l1Q9EQ80 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 137.3 ms