Protein–RNA interactions for Protein: Q9D4F8

Tubgcp4, Gamma-tubulin complex component 4, mousemouse

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp4Q9D4F8 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.91■□□□□ 0.94
Tubgcp4Q9D4F8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubgcp4Q9D4F8 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubgcp4Q9D4F8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tubgcp4Q9D4F8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Tubgcp4Q9D4F8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubgcp4Q9D4F8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubgcp4Q9D4F8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tubgcp4Q9D4F8 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Tubgcp4Q9D4F8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Gm26571-201ENSMUST00000181399 666 ntBASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tubgcp4Q9D4F8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Tubgcp4Q9D4F8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Tubgcp4Q9D4F8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Gm27801-201ENSMUST00000184174 223 ntBASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Tubgcp4Q9D4F8 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp4Q9D4F8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.85■□□□□ 0.93
Tubgcp4Q9D4F8 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.85■□□□□ 0.93
Tubgcp4Q9D4F8 Gm42642-201ENSMUST00000200683 355 ntBASIC20.85■□□□□ 0.93
Tubgcp4Q9D4F8 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp4Q9D4F8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Tubgcp4Q9D4F8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Tubgcp4Q9D4F8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Tubgcp4Q9D4F8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Tubgcp4Q9D4F8 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp4Q9D4F8 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Tubgcp4Q9D4F8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Tubgcp4Q9D4F8 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.81■□□□□ 0.92
Tubgcp4Q9D4F8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp4Q9D4F8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp4Q9D4F8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp4Q9D4F8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Tubgcp4Q9D4F8 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Tubgcp4Q9D4F8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.81■□□□□ 0.92
Tubgcp4Q9D4F8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms