Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Ssu72Q9CY97 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Gm40881-201ENSMUST00000223397 166 ntBASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 AA386476-201ENSMUST00000098781 1665 ntBASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ssu72Q9CY97 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssu72Q9CY97 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssu72Q9CY97 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssu72Q9CY97 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.44■□□□□ 0.7
Ssu72Q9CY97 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ssu72Q9CY97 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ssu72Q9CY97 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ssu72Q9CY97 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.43■□□□□ 0.7
Ssu72Q9CY97 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Gm5921-201ENSMUST00000075898 882 ntBASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ssu72Q9CY97 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ssu72Q9CY97 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Gm9870-201ENSMUST00000063874 645 ntBASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ssu72Q9CY97 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ssu72Q9CY97 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ssu72Q9CY97 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ssu72Q9CY97 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ssu72Q9CY97 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ssu72Q9CY97 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ssu72Q9CY97 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms