Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Gm21956-201ENSMUST00000179946 522 ntBASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Gm13241-201ENSMUST00000094493 780 ntBASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Khdc3Q9CWU5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.58
Khdc3Q9CWU5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Khdc3Q9CWU5 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Khdc3Q9CWU5 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Khdc3Q9CWU5 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Khdc3Q9CWU5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Khdc3Q9CWU5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Khdc3Q9CWU5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Khdc3Q9CWU5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Khdc3Q9CWU5 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms