Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrrc40Q9CRC8 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrrc40Q9CRC8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lrrc40Q9CRC8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Lrrc40Q9CRC8 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Gm9847-201ENSMUST00000052528 599 ntBASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.39■□□□□ 0.69
Lrrc40Q9CRC8 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrrc40Q9CRC8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrrc40Q9CRC8 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lrrc40Q9CRC8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lrrc40Q9CRC8 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrc40Q9CRC8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrc40Q9CRC8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.34■□□□□ 0.69
Lrrc40Q9CRC8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrc40Q9CRC8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lrrc40Q9CRC8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrc40Q9CRC8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrc40Q9CRC8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrc40Q9CRC8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lrrc40Q9CRC8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc40Q9CRC8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc40Q9CRC8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lrrc40Q9CRC8 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.33■□□□□ 0.68
Lrrc40Q9CRC8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Lrrc40Q9CRC8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Lrrc40Q9CRC8 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lrrc40Q9CRC8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Lrrc40Q9CRC8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms