Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.1■□□□□ 0.81
Gtf2ird2Q99NI3 Gm18284-201ENSMUST00000172604 624 ntBASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gtf2ird2Q99NI3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gtf2ird2Q99NI3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2ird2Q99NI3 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2ird2Q99NI3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2ird2Q99NI3 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gtf2ird2Q99NI3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Gtf2ird2Q99NI3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gtf2ird2Q99NI3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Gm8495-201ENSMUST00000188740 694 ntBASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gtf2ird2Q99NI3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.05■□□□□ 0.8
Gtf2ird2Q99NI3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gtf2ird2Q99NI3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.03■□□□□ 0.8
Gtf2ird2Q99NI3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Gtf2ird2Q99NI3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Gtf2ird2Q99NI3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Gtf2ird2Q99NI3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gtf2ird2Q99NI3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms