Protein–RNA interactions for Protein: Q96EQ9

Prdm9, Histone-lysine N-methyltransferase PRDM9, mousemouse

Predictions only

Length 843 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm9Q96EQ9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Prdm9Q96EQ9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Prdm9Q96EQ9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Prdm9Q96EQ9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Prdm9Q96EQ9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Gm26571-201ENSMUST00000181399 666 ntBASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.26■□□□□ 0.67
Prdm9Q96EQ9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Prdm9Q96EQ9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Gm42778-201ENSMUST00000199644 553 ntBASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Gm9988-201ENSMUST00000069786 435 ntBASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Prdm9Q96EQ9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm9Q96EQ9 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm9Q96EQ9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm9Q96EQ9 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm9Q96EQ9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Prdm9Q96EQ9 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm9Q96EQ9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Prdm9Q96EQ9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Gm10849-201ENSMUST00000100397 618 ntBASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Prdm9Q96EQ9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm9Q96EQ9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm9Q96EQ9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm9Q96EQ9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Prdm9Q96EQ9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm9Q96EQ9 Gm10033-202ENSMUST00000211874 928 ntBASIC19.21■□□□□ 0.67
Prdm9Q96EQ9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Prdm9Q96EQ9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Gm42569-201ENSMUST00000200539 472 ntBASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Gm18671-201ENSMUST00000214826 683 ntBASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Prdm9Q96EQ9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms