Protein–RNA interactions for Protein: Q91Y20

Pcdha10, Protocadherin alpha-10, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha10Q91Y20 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Pcdha10Q91Y20 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha10Q91Y20 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha10Q91Y20 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha10Q91Y20 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha10Q91Y20 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdha10Q91Y20 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdha10Q91Y20 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.28■□□□□ 0.84
Pcdha10Q91Y20 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha10Q91Y20 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha10Q91Y20 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Pcdha10Q91Y20 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdha10Q91Y20 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha10Q91Y20 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha10Q91Y20 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.27■□□□□ 0.84
Pcdha10Q91Y20 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdha10Q91Y20 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha10Q91Y20 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdha10Q91Y20 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdha10Q91Y20 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.27■□□□□ 0.83
Pcdha10Q91Y20 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdha10Q91Y20 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdha10Q91Y20 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdha10Q91Y20 AA386476-201ENSMUST00000098781 1665 ntBASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Gm9847-201ENSMUST00000052528 599 ntBASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdha10Q91Y20 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdha10Q91Y20 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.21■□□□□ 0.83
Pcdha10Q91Y20 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha10Q91Y20 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha10Q91Y20 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha10Q91Y20 Gm5112-201ENSMUST00000204407 2368 ntBASIC20.2■□□□□ 0.82
Pcdha10Q91Y20 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdha10Q91Y20 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Pcdha10Q91Y20 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms