Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdha11Q91Y19 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Pcdha11Q91Y19 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdha11Q91Y19 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdha11Q91Y19 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdha11Q91Y19 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Pcdha11Q91Y19 AA386476-201ENSMUST00000098781 1665 ntBASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdha11Q91Y19 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Gm8495-201ENSMUST00000188740 694 ntBASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdha11Q91Y19 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Gm5874-201ENSMUST00000096101 508 ntBASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pcdha11Q91Y19 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha11Q91Y19 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha11Q91Y19 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pcdha11Q91Y19 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pcdha11Q91Y19 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pcdha11Q91Y19 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 Gm27801-201ENSMUST00000184174 223 ntBASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 Gm10493-201ENSMUST00000097270 612 ntBASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pcdha11Q91Y19 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms