Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.45■□□□□ 0.86
Pcdha3Q91Y16 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha3Q91Y16 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha3Q91Y16 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha3Q91Y16 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pcdha3Q91Y16 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha3Q91Y16 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha3Q91Y16 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha3Q91Y16 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdha3Q91Y16 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Gm12251-201ENSMUST00000117893 792 ntBASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Pcdha3Q91Y16 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Pcdha3Q91Y16 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha3Q91Y16 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha3Q91Y16 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Gm43173-201ENSMUST00000202246 593 ntBASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Serp2-204ENSMUST00000228055 705 ntBASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdha3Q91Y16 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha3Q91Y16 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha3Q91Y16 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha3Q91Y16 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
Pcdha3Q91Y16 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdha3Q91Y16 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Gm43017-201ENSMUST00000198296 752 ntBASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdha3Q91Y16 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdha3Q91Y16 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms