Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdha8Q91Y12 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdha8Q91Y12 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdha8Q91Y12 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Gm21956-201ENSMUST00000179946 522 ntBASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdha8Q91Y12 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdha8Q91Y12 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.93■□□□□ 0.62
Pcdha8Q91Y12 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdha8Q91Y12 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha8Q91Y12 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.93■□□□□ 0.62
Pcdha8Q91Y12 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Pcdha8Q91Y12 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha8Q91Y12 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdha8Q91Y12 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdha8Q91Y12 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdha8Q91Y12 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdha8Q91Y12 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms