Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Spcs1-204ENSMUST00000226782 949 ntBASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdhb1Q91Y08 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdhb1Q91Y08 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb1Q91Y08 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb1Q91Y08 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb1Q91Y08 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb1Q91Y08 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb1Q91Y08 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb1Q91Y08 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdhb1Q91Y08 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcdhb1Q91Y08 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdhb1Q91Y08 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdhb1Q91Y08 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb1Q91Y08 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb1Q91Y08 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb1Q91Y08 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdhb1Q91Y08 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.28■□□□□ 0.84
Pcdhb1Q91Y08 Serp2-204ENSMUST00000228055 705 ntBASIC20.28■□□□□ 0.84
Pcdhb1Q91Y08 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb1Q91Y08 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb1Q91Y08 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 Gm12251-201ENSMUST00000117893 792 ntBASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Pcdhb1Q91Y08 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Pcdhb1Q91Y08 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb1Q91Y08 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb1Q91Y08 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb1Q91Y08 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb1Q91Y08 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb1Q91Y08 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb1Q91Y08 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb1Q91Y08 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb1Q91Y08 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb1Q91Y08 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms