Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.06■□□□□ 0.64
Pcdhb8Q91XZ2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb8Q91XZ2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Pcdhb8Q91XZ2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb8Q91XZ2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.06■□□□□ 0.64
Pcdhb8Q91XZ2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhb8Q91XZ2 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhb8Q91XZ2 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhb8Q91XZ2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb8Q91XZ2 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb8Q91XZ2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.03■□□□□ 0.64
Pcdhb8Q91XZ2 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb8Q91XZ2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhb8Q91XZ2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhb8Q91XZ2 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb8Q91XZ2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhb8Q91XZ2 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb8Q91XZ2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb8Q91XZ2 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhb8Q91XZ2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb8Q91XZ2 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb8Q91XZ2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhb8Q91XZ2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.01■□□□□ 0.63
Pcdhb8Q91XZ2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhb8Q91XZ2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhb8Q91XZ2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 AA386476-201ENSMUST00000098781 1665 ntBASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhb8Q91XZ2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhb8Q91XZ2 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms