Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga9Q91XX9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Gm43173-201ENSMUST00000202246 593 ntBASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga9Q91XX9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga9Q91XX9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga9Q91XX9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga9Q91XX9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga9Q91XX9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga9Q91XX9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga9Q91XX9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.33■□□□□ 0.68
Pcdhga9Q91XX9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga9Q91XX9 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga9Q91XX9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga9Q91XX9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga9Q91XX9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga9Q91XX9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Pcdhga9Q91XX9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga9Q91XX9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga9Q91XX9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 AA386476-201ENSMUST00000098781 1665 ntBASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga9Q91XX9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
Pcdhga9Q91XX9 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga9Q91XX9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhga9Q91XX9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga9Q91XX9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga9Q91XX9 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms