Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdhgc3Q91XX1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgc3Q91XX1 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdhgc3Q91XX1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdhgc3Q91XX1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdhgc3Q91XX1 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc3Q91XX1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc3Q91XX1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc3Q91XX1 Rarb-207ENSMUST00000225921 2756 ntBASIC18.37■□□□□ 0.53
Pcdhgc3Q91XX1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc3Q91XX1 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc3Q91XX1 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdhgc3Q91XX1 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdhgc3Q91XX1 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 BC021767-201ENSMUST00000126387 1716 ntBASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.35■□□□□ 0.53
Pcdhgc3Q91XX1 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Gm43566-201ENSMUST00000196851 808 ntBASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc3Q91XX1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc3Q91XX1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc3Q91XX1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Pcdhgc3Q91XX1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc3Q91XX1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc3Q91XX1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc3Q91XX1 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms