Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.55■■□□□ 1.2
Trex1Q91XB0 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC22.55■■□□□ 1.2
Trex1Q91XB0 Gm38205-201ENSMUST00000192243 258 ntBASIC22.55■■□□□ 1.2
Trex1Q91XB0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trex1Q91XB0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trex1Q91XB0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Trex1Q91XB0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC22.55■■□□□ 1.2
Trex1Q91XB0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Gm13146-201ENSMUST00000118508 780 ntBASIC22.54■■□□□ 1.2
Trex1Q91XB0 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Trex1Q91XB0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Trex1Q91XB0 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.52■■□□□ 1.2
Trex1Q91XB0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.52■■□□□ 1.2
Trex1Q91XB0 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.52■■□□□ 1.2
Trex1Q91XB0 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
Trex1Q91XB0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.51■■□□□ 1.19
Trex1Q91XB0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trex1Q91XB0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC22.51■■□□□ 1.19
Trex1Q91XB0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Trex1Q91XB0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.5■■□□□ 1.19
Trex1Q91XB0 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Gm13042-201ENSMUST00000119244 1955 ntBASIC22.5■■□□□ 1.19
Trex1Q91XB0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Trex1Q91XB0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Trex1Q91XB0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.49■■□□□ 1.19
Trex1Q91XB0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.49■■□□□ 1.19
Trex1Q91XB0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC22.49■■□□□ 1.19
Trex1Q91XB0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trex1Q91XB0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.49■■□□□ 1.19
Trex1Q91XB0 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Trex1Q91XB0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.48■■□□□ 1.19
Trex1Q91XB0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trex1Q91XB0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC22.48■■□□□ 1.19
Trex1Q91XB0 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trex1Q91XB0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.48■■□□□ 1.19
Trex1Q91XB0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trex1Q91XB0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trex1Q91XB0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trex1Q91XB0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Trex1Q91XB0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Trex1Q91XB0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trex1Q91XB0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.47■■□□□ 1.19
Trex1Q91XB0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Trex1Q91XB0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Trex1Q91XB0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC22.46■■□□□ 1.19
Trex1Q91XB0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trex1Q91XB0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trex1Q91XB0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Trex1Q91XB0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
Trex1Q91XB0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Trex1Q91XB0 Mir5133-201ENSMUST00000174955 77 ntBASIC22.45■■□□□ 1.18
Trex1Q91XB0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC22.45■■□□□ 1.18
Trex1Q91XB0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Trex1Q91XB0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms