Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhb11Q91UZ8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb11Q91UZ8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb11Q91UZ8 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb11Q91UZ8 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb11Q91UZ8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb11Q91UZ8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb11Q91UZ8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb11Q91UZ8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pcdhb11Q91UZ8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb11Q91UZ8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb11Q91UZ8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb11Q91UZ8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb11Q91UZ8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.02■□□□□ 0.8
Pcdhb11Q91UZ8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb11Q91UZ8 AA386476-201ENSMUST00000098781 1665 ntBASIC20.02■□□□□ 0.8
Pcdhb11Q91UZ8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb11Q91UZ8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.02■□□□□ 0.79
Pcdhb11Q91UZ8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb11Q91UZ8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb11Q91UZ8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Smad6-203ENSMUST00000179458 273 ntBASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Serp2-204ENSMUST00000228055 705 ntBASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb11Q91UZ8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb11Q91UZ8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb11Q91UZ8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdhb11Q91UZ8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb11Q91UZ8 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Gm43017-201ENSMUST00000198296 752 ntBASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb11Q91UZ8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb11Q91UZ8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb11Q91UZ8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb11Q91UZ8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.96■□□□□ 0.79
Pcdhb11Q91UZ8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb11Q91UZ8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
Pcdhb11Q91UZ8 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdhb11Q91UZ8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms