Protein–RNA interactions for Protein: Q8VHT7

Gtf3a, Transcription factor IIIA, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3aQ8VHT7 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Gtf3aQ8VHT7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Gtf3aQ8VHT7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Gtf3aQ8VHT7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Gtf3aQ8VHT7 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Gtf3aQ8VHT7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Gtf3aQ8VHT7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Gtf3aQ8VHT7 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Gtf3aQ8VHT7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gtf3aQ8VHT7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gtf3aQ8VHT7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Gtf3aQ8VHT7 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Gtf3aQ8VHT7 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
Gtf3aQ8VHT7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Gtf3aQ8VHT7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms