Protein–RNA interactions for Protein: Q8R1J1

Tm6sf2, Transmembrane 6 superfamily member 2, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tm6sf2Q8R1J1 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tm6sf2Q8R1J1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tm6sf2Q8R1J1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tm6sf2Q8R1J1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tm6sf2Q8R1J1 AA386476-201ENSMUST00000098781 1665 ntBASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Tm6sf2Q8R1J1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf2Q8R1J1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf2Q8R1J1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tm6sf2Q8R1J1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Tm6sf2Q8R1J1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Tm6sf2Q8R1J1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf2Q8R1J1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.32■□□□□ 0.52
Tm6sf2Q8R1J1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tm6sf2Q8R1J1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Tm6sf2Q8R1J1 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tm6sf2Q8R1J1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Gm18284-201ENSMUST00000172604 624 ntBASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tm6sf2Q8R1J1 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms