Protein–RNA interactions for Protein: Q8K1S1

Lgi4, Leucine-rich repeat LGI family member 4, mousemouse

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi4Q8K1S1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Gm12527-201ENSMUST00000117967 564 ntBASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Lgi4Q8K1S1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Lgi4Q8K1S1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Gm27801-201ENSMUST00000184174 223 ntBASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lgi4Q8K1S1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Lgi4Q8K1S1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
Lgi4Q8K1S1 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lgi4Q8K1S1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lgi4Q8K1S1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Mir7071-201ENSMUST00000184847 69 ntBASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lgi4Q8K1S1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lgi4Q8K1S1 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lgi4Q8K1S1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lgi4Q8K1S1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lgi4Q8K1S1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lgi4Q8K1S1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lgi4Q8K1S1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms