Protein–RNA interactions for Protein: Q8C4H2

Samd3, Sterile alpha motif domain-containing protein 3, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd3Q8C4H2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samd3Q8C4H2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Samd3Q8C4H2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.27■□□□□ 0.83
Samd3Q8C4H2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Samd3Q8C4H2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Samd3Q8C4H2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samd3Q8C4H2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samd3Q8C4H2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Samd3Q8C4H2 Gm7291-201ENSMUST00000199147 382 ntBASIC20.26■□□□□ 0.83
Samd3Q8C4H2 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.26■□□□□ 0.83
Samd3Q8C4H2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.26■□□□□ 0.83
Samd3Q8C4H2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 AV356131-201ENSMUST00000206201 750 ntBASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Samd3Q8C4H2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Gm13234-201ENSMUST00000120010 747 ntBASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Samd3Q8C4H2 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Samd3Q8C4H2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Reep4-203ENSMUST00000226563 1444 ntBASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Samd3Q8C4H2 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Samd3Q8C4H2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Samd3Q8C4H2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Samd3Q8C4H2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms