Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
Cc2d1bQ8BRN9 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.58■■□□□ 1.05
Cc2d1bQ8BRN9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cc2d1bQ8BRN9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cc2d1bQ8BRN9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cc2d1bQ8BRN9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Cc2d1bQ8BRN9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cc2d1bQ8BRN9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cc2d1bQ8BRN9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cc2d1bQ8BRN9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Gm9847-201ENSMUST00000052528 599 ntBASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.55■■□□□ 1.04
Cc2d1bQ8BRN9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Cc2d1bQ8BRN9 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Cc2d1bQ8BRN9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Cc2d1bQ8BRN9 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cc2d1bQ8BRN9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Cc2d1bQ8BRN9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Cc2d1bQ8BRN9 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.51■■□□□ 1.03
Cc2d1bQ8BRN9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Cc2d1bQ8BRN9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Cc2d1bQ8BRN9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cc2d1bQ8BRN9 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cc2d1bQ8BRN9 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cc2d1bQ8BRN9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Cc2d1bQ8BRN9 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cc2d1bQ8BRN9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Cc2d1bQ8BRN9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Cc2d1bQ8BRN9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cc2d1bQ8BRN9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Cc2d1bQ8BRN9 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms