Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Cpsf4Q8BQZ5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Cpsf4Q8BQZ5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Cpsf4Q8BQZ5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Gm43137-201ENSMUST00000198052 594 ntBASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Cpsf4Q8BQZ5 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Cpsf4Q8BQZ5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cpsf4Q8BQZ5 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cpsf4Q8BQZ5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4Q8BQZ5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.85■□□□□ 0.61
Cpsf4Q8BQZ5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4Q8BQZ5 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4Q8BQZ5 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4Q8BQZ5 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4Q8BQZ5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cpsf4Q8BQZ5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
Cpsf4Q8BQZ5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.83■□□□□ 0.61
Cpsf4Q8BQZ5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms