Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip4Q8BQP8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip4Q8BQP8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.63■■□□□ 1.05
Rab11fip4Q8BQP8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip4Q8BQP8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip4Q8BQP8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip4Q8BQP8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip4Q8BQP8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip4Q8BQP8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Gm43173-201ENSMUST00000202246 593 ntBASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rab11fip4Q8BQP8 Gm12251-201ENSMUST00000117893 792 ntBASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rab11fip4Q8BQP8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rab11fip4Q8BQP8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab11fip4Q8BQP8 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.58■■□□□ 1.05
Rab11fip4Q8BQP8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab11fip4Q8BQP8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rab11fip4Q8BQP8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Rab11fip4Q8BQP8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rab11fip4Q8BQP8 Iqck-206ENSMUST00000208658 2891 ntBASIC21.58■■□□□ 1.05
Rab11fip4Q8BQP8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rab11fip4Q8BQP8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Mir6236-201ENSMUST00000184437 123 ntBASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rab11fip4Q8BQP8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 Spcs1-204ENSMUST00000226782 949 ntBASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rab11fip4Q8BQP8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.55■■□□□ 1.04
Rab11fip4Q8BQP8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rab11fip4Q8BQP8 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rab11fip4Q8BQP8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.55■■□□□ 1.04
Rab11fip4Q8BQP8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Rab11fip4Q8BQP8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rab11fip4Q8BQP8 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rab11fip4Q8BQP8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms