Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim62Q80V85 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Trim62Q80V85 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim62Q80V85 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim62Q80V85 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim62Q80V85 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.26■□□□□ 0.83
Trim62Q80V85 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim62Q80V85 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim62Q80V85 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim62Q80V85 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim62Q80V85 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Trim62Q80V85 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim62Q80V85 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim62Q80V85 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim62Q80V85 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim62Q80V85 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim62Q80V85 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim62Q80V85 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim62Q80V85 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim62Q80V85 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim62Q80V85 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Trim62Q80V85 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Gm27801-201ENSMUST00000184174 223 ntBASIC20.24■□□□□ 0.83
Trim62Q80V85 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim62Q80V85 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.24■□□□□ 0.83
Trim62Q80V85 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim62Q80V85 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim62Q80V85 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim62Q80V85 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim62Q80V85 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim62Q80V85 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim62Q80V85 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim62Q80V85 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim62Q80V85 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim62Q80V85 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim62Q80V85 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trim62Q80V85 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.22■□□□□ 0.83
Trim62Q80V85 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.22■□□□□ 0.83
Trim62Q80V85 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim62Q80V85 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim62Q80V85 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim62Q80V85 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim62Q80V85 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.21■□□□□ 0.83
Trim62Q80V85 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim62Q80V85 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim62Q80V85 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.21■□□□□ 0.83
Trim62Q80V85 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim62Q80V85 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trim62Q80V85 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim62Q80V85 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim62Q80V85 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Trim62Q80V85 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim62Q80V85 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.2■□□□□ 0.82
Trim62Q80V85 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim62Q80V85 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim62Q80V85 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim62Q80V85 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim62Q80V85 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim62Q80V85 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim62Q80V85 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim62Q80V85 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim62Q80V85 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Trim62Q80V85 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Trim62Q80V85 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim62Q80V85 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim62Q80V85 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim62Q80V85 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim62Q80V85 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.18■□□□□ 0.82
Trim62Q80V85 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.18■□□□□ 0.82
Trim62Q80V85 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim62Q80V85 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms