Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.62■□□□□ 0.73
Rpp38Q80UU2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rpp38Q80UU2 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rpp38Q80UU2 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Smad6-203ENSMUST00000179458 273 ntBASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rpp38Q80UU2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.59■□□□□ 0.73
Rpp38Q80UU2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rpp38Q80UU2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rpp38Q80UU2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rpp38Q80UU2 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
Rpp38Q80UU2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rpp38Q80UU2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rpp38Q80UU2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp38Q80UU2 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp38Q80UU2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rpp38Q80UU2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp38Q80UU2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rpp38Q80UU2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rpp38Q80UU2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rpp38Q80UU2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp38Q80UU2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.55■□□□□ 0.72
Rpp38Q80UU2 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp38Q80UU2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp38Q80UU2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rpp38Q80UU2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rpp38Q80UU2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp38Q80UU2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.53■□□□□ 0.72
Rpp38Q80UU2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp38Q80UU2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rpp38Q80UU2 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rpp38Q80UU2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpp38Q80UU2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.71
Rpp38Q80UU2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rpp38Q80UU2 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp38Q80UU2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.51■□□□□ 0.71
Rpp38Q80UU2 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp38Q80UU2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp38Q80UU2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.51■□□□□ 0.71
Rpp38Q80UU2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rpp38Q80UU2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rpp38Q80UU2 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.5■□□□□ 0.71
Rpp38Q80UU2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Rpp38Q80UU2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rpp38Q80UU2 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Rpp38Q80UU2 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.5■□□□□ 0.71
Rpp38Q80UU2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rpp38Q80UU2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms