Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdh8Q7TSK3 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh8Q7TSK3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh8Q7TSK3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdh8Q7TSK3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdh8Q7TSK3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdh8Q7TSK3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Gm29257-201ENSMUST00000186115 639 ntBASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh8Q7TSK3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh8Q7TSK3 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh8Q7TSK3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Gm9988-201ENSMUST00000069786 435 ntBASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh8Q7TSK3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh8Q7TSK3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh8Q7TSK3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh8Q7TSK3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh8Q7TSK3 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms