Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rfx4Q7TNK1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Rfx4Q7TNK1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rfx4Q7TNK1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rfx4Q7TNK1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rfx4Q7TNK1 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rfx4Q7TNK1 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rfx4Q7TNK1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx4Q7TNK1 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx4Q7TNK1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.65■□□□□ 0.58
Rfx4Q7TNK1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx4Q7TNK1 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rfx4Q7TNK1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Rfx4Q7TNK1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Rfx4Q7TNK1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Gm45444-201ENSMUST00000211394 898 ntBASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rfx4Q7TNK1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Rfx4Q7TNK1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms