Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Hmgb4Q6P8W9 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Gm18671-201ENSMUST00000214826 683 ntBASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Hmgb4Q6P8W9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hmgb4Q6P8W9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Gm10849-201ENSMUST00000100397 618 ntBASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Gm42778-201ENSMUST00000199644 553 ntBASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Hmgb4Q6P8W9 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hmgb4Q6P8W9 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.39■□□□□ 0.85
Hmgb4Q6P8W9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Hmgb4Q6P8W9 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hmgb4Q6P8W9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hmgb4Q6P8W9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Hmgb4Q6P8W9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Hmgb4Q6P8W9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hmgb4Q6P8W9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Hmgb4Q6P8W9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.35■□□□□ 0.85
Hmgb4Q6P8W9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms