Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Krt39Q6IFX4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Krt39Q6IFX4 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Krt39Q6IFX4 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Krt39Q6IFX4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.58■■□□□ 1.05
Krt39Q6IFX4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
Krt39Q6IFX4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Krt39Q6IFX4 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Krt39Q6IFX4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Krt39Q6IFX4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Krt39Q6IFX4 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Krt39Q6IFX4 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Krt39Q6IFX4 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Krt39Q6IFX4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Krt39Q6IFX4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Krt39Q6IFX4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC21.54■■□□□ 1.04
Krt39Q6IFX4 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.54■■□□□ 1.04
Krt39Q6IFX4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.54■■□□□ 1.04
Krt39Q6IFX4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.54■■□□□ 1.04
Krt39Q6IFX4 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Krt39Q6IFX4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
Krt39Q6IFX4 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.53■■□□□ 1.04
Krt39Q6IFX4 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Krt39Q6IFX4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Krt39Q6IFX4 Gm5784-201ENSMUST00000179344 2478 ntBASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Krt39Q6IFX4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Krt39Q6IFX4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt39Q6IFX4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt39Q6IFX4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Krt39Q6IFX4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.51■■□□□ 1.03
Krt39Q6IFX4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Krt39Q6IFX4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Krt39Q6IFX4 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Krt39Q6IFX4 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Krt39Q6IFX4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Krt39Q6IFX4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Krt39Q6IFX4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.5■■□□□ 1.03
Krt39Q6IFX4 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21.5■■□□□ 1.03
Krt39Q6IFX4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Krt39Q6IFX4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Krt39Q6IFX4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Krt39Q6IFX4 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Krt39Q6IFX4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.49■■□□□ 1.03
Krt39Q6IFX4 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.49■■□□□ 1.03
Krt39Q6IFX4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Krt39Q6IFX4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Krt39Q6IFX4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms