Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt42Q6IFX2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Krt42Q6IFX2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Krt42Q6IFX2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Krt42Q6IFX2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Krt42Q6IFX2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Krt42Q6IFX2 BC021767-201ENSMUST00000126387 1716 ntBASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Gm10420-201ENSMUST00000121713 882 ntBASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Krt42Q6IFX2 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Gm11175-201ENSMUST00000116172 543 ntBASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Krt42Q6IFX2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Krt42Q6IFX2 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt42Q6IFX2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt42Q6IFX2 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt42Q6IFX2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt42Q6IFX2 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Krt42Q6IFX2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Krt42Q6IFX2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Krt42Q6IFX2 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Krt42Q6IFX2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt42Q6IFX2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Krt42Q6IFX2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Krt42Q6IFX2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.01■□□□□ 0.79
Krt42Q6IFX2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20■□□□□ 0.79
Krt42Q6IFX2 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Krt42Q6IFX2 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Krt42Q6IFX2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms