Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Six1Q62231 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six1Q62231 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Six1Q62231 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
Six1Q62231 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Six1Q62231 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
Six1Q62231 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Six1Q62231 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six1Q62231 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six1Q62231 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six1Q62231 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six1Q62231 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Six1Q62231 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six1Q62231 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six1Q62231 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six1Q62231 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Six1Q62231 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six1Q62231 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six1Q62231 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Six1Q62231 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six1Q62231 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six1Q62231 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.11■□□□□ 0.81
Six1Q62231 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six1Q62231 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Six1Q62231 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.11■□□□□ 0.81
Six1Q62231 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six1Q62231 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
Six1Q62231 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Six1Q62231 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six1Q62231 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.1■□□□□ 0.81
Six1Q62231 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.1■□□□□ 0.81
Six1Q62231 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.1■□□□□ 0.81
Six1Q62231 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Six1Q62231 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Six1Q62231 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six1Q62231 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six1Q62231 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six1Q62231 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Six1Q62231 Gm18688-201ENSMUST00000204695 1859 ntBASIC20.09■□□□□ 0.81
Six1Q62231 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.09■□□□□ 0.81
Six1Q62231 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six1Q62231 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.09■□□□□ 0.81
Six1Q62231 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.09■□□□□ 0.81
Six1Q62231 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six1Q62231 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.09■□□□□ 0.81
Six1Q62231 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.09■□□□□ 0.81
Six1Q62231 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six1Q62231 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Six1Q62231 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Six1Q62231 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Six1Q62231 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Six1Q62231 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.08■□□□□ 0.81
Six1Q62231 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Six1Q62231 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.08■□□□□ 0.8
Six1Q62231 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Six1Q62231 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Six1Q62231 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Six1Q62231 Gm43231-201ENSMUST00000202960 2258 ntBASIC20.07■□□□□ 0.8
Six1Q62231 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Six1Q62231 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Six1Q62231 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.07■□□□□ 0.8
Six1Q62231 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.07■□□□□ 0.8
Six1Q62231 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Six1Q62231 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.07■□□□□ 0.8
Six1Q62231 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Six1Q62231 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Six1Q62231 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.06■□□□□ 0.8
Six1Q62231 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 Gm45102-201ENSMUST00000207427 857 ntBASIC20.06■□□□□ 0.8
Six1Q62231 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.06■□□□□ 0.8
Six1Q62231 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Six1Q62231 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six1Q62231 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six1Q62231 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six1Q62231 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six1Q62231 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Six1Q62231 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six1Q62231 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Six1Q62231 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Six1Q62231 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six1Q62231 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six1Q62231 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.04■□□□□ 0.8
Six1Q62231 Gm14117-201ENSMUST00000122417 843 ntBASIC20.04■□□□□ 0.8
Six1Q62231 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.04■□□□□ 0.8
Six1Q62231 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Six1Q62231 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms