Protein–RNA interactions for Protein: Q62191

Trim21, E3 ubiquitin-protein ligase TRIM21, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim21Q62191 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim21Q62191 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim21Q62191 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim21Q62191 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim21Q62191 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim21Q62191 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim21Q62191 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.54■□□□□ 0.88
Trim21Q62191 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim21Q62191 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim21Q62191 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Trim21Q62191 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim21Q62191 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.54■□□□□ 0.88
Trim21Q62191 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim21Q62191 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim21Q62191 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim21Q62191 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim21Q62191 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.53■□□□□ 0.88
Trim21Q62191 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim21Q62191 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.53■□□□□ 0.88
Trim21Q62191 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim21Q62191 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.53■□□□□ 0.88
Trim21Q62191 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim21Q62191 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim21Q62191 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim21Q62191 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim21Q62191 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim21Q62191 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
Trim21Q62191 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim21Q62191 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim21Q62191 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim21Q62191 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim21Q62191 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim21Q62191 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim21Q62191 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim21Q62191 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trim21Q62191 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.51■□□□□ 0.87
Trim21Q62191 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.51■□□□□ 0.87
Trim21Q62191 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trim21Q62191 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim21Q62191 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.5■□□□□ 0.87
Trim21Q62191 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trim21Q62191 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trim21Q62191 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim21Q62191 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Trim21Q62191 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.49■□□□□ 0.87
Trim21Q62191 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trim21Q62191 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.49■□□□□ 0.87
Trim21Q62191 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trim21Q62191 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trim21Q62191 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim21Q62191 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim21Q62191 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim21Q62191 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim21Q62191 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Trim21Q62191 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim21Q62191 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim21Q62191 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trim21Q62191 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.48■□□□□ 0.87
Trim21Q62191 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trim21Q62191 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.47■□□□□ 0.87
Trim21Q62191 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim21Q62191 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trim21Q62191 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trim21Q62191 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Trim21Q62191 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trim21Q62191 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim21Q62191 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.46■□□□□ 0.87
Trim21Q62191 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim21Q62191 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Trim21Q62191 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Trim21Q62191 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trim21Q62191 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.45■□□□□ 0.86
Trim21Q62191 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms