Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Xrcc1Q60596 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Notumos-201ENSMUST00000151998 2659 ntBASIC18.68■□□□□ 0.58
Xrcc1Q60596 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.68■□□□□ 0.58
Xrcc1Q60596 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Xrcc1Q60596 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Gm40848-201ENSMUST00000221998 324 ntBASIC18.66■□□□□ 0.58
Xrcc1Q60596 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.66■□□□□ 0.58
Xrcc1Q60596 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Xrcc1Q60596 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Gm11421-201ENSMUST00000122124 294 ntBASIC18.65■□□□□ 0.58
Xrcc1Q60596 Gm43060-201ENSMUST00000200621 289 ntBASIC18.65■□□□□ 0.58
Xrcc1Q60596 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Xrcc1Q60596 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Xrcc1Q60596 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Xrcc1Q60596 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Xrcc1Q60596 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Xrcc1Q60596 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Xrcc1Q60596 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Xrcc1Q60596 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Xrcc1Q60596 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Xrcc1Q60596 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Xrcc1Q60596 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Xrcc1Q60596 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 AA386476-201ENSMUST00000098781 1665 ntBASIC18.63■□□□□ 0.57
Xrcc1Q60596 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.63■□□□□ 0.57
Xrcc1Q60596 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Xrcc1Q60596 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Xrcc1Q60596 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.62■□□□□ 0.57
Xrcc1Q60596 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.62■□□□□ 0.57
Xrcc1Q60596 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Xrcc1Q60596 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Xrcc1Q60596 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Xrcc1Q60596 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Xrcc1Q60596 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Xrcc1Q60596 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms