Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rapgef1Q3UHC1 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rapgef1Q3UHC1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.3■■□□□ 1
Rapgef1Q3UHC1 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
Rapgef1Q3UHC1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Gm43137-201ENSMUST00000198052 594 ntBASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rapgef1Q3UHC1 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rapgef1Q3UHC1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rapgef1Q3UHC1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rapgef1Q3UHC1 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rapgef1Q3UHC1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rapgef1Q3UHC1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rapgef1Q3UHC1 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rapgef1Q3UHC1 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rapgef1Q3UHC1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Rapgef1Q3UHC1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Gm6139-201ENSMUST00000079261 882 ntBASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rapgef1Q3UHC1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rapgef1Q3UHC1 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rapgef1Q3UHC1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rapgef1Q3UHC1 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms