Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.65□□□□□ -0.06
Hspg2Q05793 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hspg2Q05793 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hspg2Q05793 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Hspg2Q05793 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Hspg2Q05793 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hspg2Q05793 Gm715-201ENSMUST00000117865 831 ntBASIC14.65□□□□□ -0.06
Hspg2Q05793 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hspg2Q05793 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Hspg2Q05793 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hspg2Q05793 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Hspg2Q05793 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hspg2Q05793 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hspg2Q05793 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.64□□□□□ -0.07
Hspg2Q05793 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hspg2Q05793 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Hspg2Q05793 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hspg2Q05793 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.64□□□□□ -0.07
Hspg2Q05793 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC14.64□□□□□ -0.07
Hspg2Q05793 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Hspg2Q05793 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hspg2Q05793 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hspg2Q05793 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hspg2Q05793 Gm5408-201ENSMUST00000197998 747 ntBASIC14.63□□□□□ -0.07
Hspg2Q05793 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Hspg2Q05793 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC14.63□□□□□ -0.07
Hspg2Q05793 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Hspg2Q05793 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hspg2Q05793 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.63□□□□□ -0.07
Hspg2Q05793 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hspg2Q05793 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Hspg2Q05793 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Hspg2Q05793 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Hspg2Q05793 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hspg2Q05793 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Hspg2Q05793 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Hspg2Q05793 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Hspg2Q05793 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.62□□□□□ -0.07
Hspg2Q05793 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.62□□□□□ -0.07
Hspg2Q05793 Gm15565-201ENSMUST00000118890 427 ntBASIC14.62□□□□□ -0.07
Hspg2Q05793 Gm13146-201ENSMUST00000118508 780 ntBASIC14.62□□□□□ -0.07
Hspg2Q05793 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.62□□□□□ -0.07
Hspg2Q05793 Trmt13-210ENSMUST00000198454 880 ntBASIC14.62□□□□□ -0.07
Hspg2Q05793 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Hspg2Q05793 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Gm26766-202ENSMUST00000227544 2347 ntBASIC14.61□□□□□ -0.07
Hspg2Q05793 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.61□□□□□ -0.07
Hspg2Q05793 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Hspg2Q05793 Gm6365-201ENSMUST00000054711 744 ntBASIC14.61□□□□□ -0.07
Hspg2Q05793 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Hspg2Q05793 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Hspg2Q05793 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Hspg2Q05793 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Hspg2Q05793 Gm20634-201ENSMUST00000090779 2956 ntBASIC14.6□□□□□ -0.07
Hspg2Q05793 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Hspg2Q05793 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hspg2Q05793 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hspg2Q05793 Dmtn-209ENSMUST00000228295 2572 ntBASIC14.6□□□□□ -0.07
Hspg2Q05793 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.6□□□□□ -0.07
Hspg2Q05793 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hspg2Q05793 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hspg2Q05793 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hspg2Q05793 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Hspg2Q05793 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Hspg2Q05793 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.59□□□□□ -0.07
Hspg2Q05793 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.59□□□□□ -0.07
Hspg2Q05793 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.59□□□□□ -0.07
Hspg2Q05793 Gm32051-202ENSMUST00000197905 2385 ntBASIC14.59□□□□□ -0.07
Hspg2Q05793 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Hspg2Q05793 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Hspg2Q05793 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Hspg2Q05793 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.58□□□□□ -0.07
Hspg2Q05793 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hspg2Q05793 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hspg2Q05793 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hspg2Q05793 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hspg2Q05793 Gm27275-201ENSMUST00000184318 272 ntBASIC14.58□□□□□ -0.08
Hspg2Q05793 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Hspg2Q05793 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Hspg2Q05793 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.58□□□□□ -0.08
Hspg2Q05793 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.58□□□□□ -0.08
Hspg2Q05793 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Hspg2Q05793 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.57□□□□□ -0.08
Hspg2Q05793 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms